Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 NOC2LP2-201ENST00000407594 1944 ntBASIC16.82■□□□□ 0.28
DTX3Q8N9I9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 AL031598.1-201ENST00000561511 1773 ntBASIC16.82■□□□□ 0.28
DTX3Q8N9I9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
DTX3Q8N9I9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 NCF1B-203ENST00000435988 1254 ntBASIC16.81■□□□□ 0.28
DTX3Q8N9I9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 AL121832.2-201ENST00000610979 668 ntBASIC16.81■□□□□ 0.28
DTX3Q8N9I9 AC013268.1-206ENST00000638368 961 ntBASIC16.81■□□□□ 0.28
DTX3Q8N9I9 AC112229.1-201ENST00000639295 961 ntBASIC16.81■□□□□ 0.28
DTX3Q8N9I9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 AC139713.2-201ENST00000641328 2723 ntBASIC16.81■□□□□ 0.28
DTX3Q8N9I9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
DTX3Q8N9I9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 AC141586.3-201ENST00000562166 1838 ntBASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 HLA-L-209ENST00000420110 1011 ntBASIC16.8■□□□□ 0.28
DTX3Q8N9I9 PGM5P4-201ENST00000421970 445 ntBASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 MFSD11-216ENST00000590393 1141 ntBASIC16.8■□□□□ 0.28
DTX3Q8N9I9 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
DTX3Q8N9I9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms