Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 PKD1P1-201ENST00000458669 6805 ntBASIC18.11■□□□□ 0.49
SLC44A2Q8IWA5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 TUBB8P6-201ENST00000436895 1288 ntBASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 KRT18P16-201ENST00000510337 1294 ntBASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 ITM2C-210ENST00000620962 501 ntBASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC44A2Q8IWA5 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 TEX21P-204ENST00000641479 1693 ntBASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 C1QBPP2-201ENST00000528754 825 ntBASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 AC004264.1-201ENST00000608354 794 ntBASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 AL049812.1-201ENST00000432563 2267 ntBASIC18.09■□□□□ 0.49
SLC44A2Q8IWA5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC44A2Q8IWA5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC44A2Q8IWA5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC44A2Q8IWA5 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms