Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CROCCP3Q8IVE0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CROCCP3Q8IVE0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 TSPY26P-201ENST00000476365 1326 ntBASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 KRT16P6-202ENST00000425692 1426 ntBASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 MIR572-201ENST00000384983 95 ntBASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 AC008894.3-201ENST00000624324 3103 ntBASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CROCCP3Q8IVE0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CROCCP3Q8IVE0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms