Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LYSMD2Q8IV50 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 AL136967.2-201ENST00000623968 743 ntBASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LYSMD2Q8IV50 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AC108860.2-201ENST00000562760 2183 ntBASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 KRT16P6-202ENST00000425692 1426 ntBASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AC105265.2-201ENST00000467189 838 ntBASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AP001160.3-201ENST00000601484 763 ntBASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD2Q8IV50 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AC096631.2-201ENST00000436136 790 ntBASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AC091305.1-201ENST00000479476 895 ntBASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AF213884.3-201ENST00000563833 479 ntBASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 CCDC92B-201ENST00000575506 885 ntBASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 AC104187.1-201ENST00000607510 612 ntBASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD2Q8IV50 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms