Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC29■■■□□ 2.23
ABCA9Q8IUA7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC29■■■□□ 2.23
ABCA9Q8IUA7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC29■■■□□ 2.23
ABCA9Q8IUA7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC29■■■□□ 2.23
ABCA9Q8IUA7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC29■■■□□ 2.23
ABCA9Q8IUA7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC29■■■□□ 2.23
ABCA9Q8IUA7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC29■■■□□ 2.23
ABCA9Q8IUA7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC29■■■□□ 2.23
ABCA9Q8IUA7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 KRT18P23-201ENST00000435622 1283 ntBASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 AC012676.1-201ENST00000574705 1949 ntBASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
ABCA9Q8IUA7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 AC104390.1-201ENST00000555663 520 ntBASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 AC243591.1-201ENST00000452967 1364 ntBASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 KRT18P58-201ENST00000527480 1120 ntBASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
ABCA9Q8IUA7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 NUS1P2-201ENST00000417358 873 ntBASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 AC091607.1-201ENST00000490318 1060 ntBASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
ABCA9Q8IUA7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 ABR-217ENST00000572441 563 ntTSL 4 BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 AC133561.1-201ENST00000568600 2415 ntBASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 AC026310.3-201ENST00000625186 2373 ntBASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.96■■■□□ 2.23
ABCA9Q8IUA7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 EMD-201ENST00000369835 966 ntTSL 3 BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 KRT18P67-201ENST00000432816 1264 ntBASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 AC018712.1-201ENST00000455767 687 ntBASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC28.95■■■□□ 2.23
ABCA9Q8IUA7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
ABCA9Q8IUA7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 AC092183.1-201ENST00000469884 875 ntBASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 AC020907.5-201ENST00000624372 1936 ntBASIC28.94■■■□□ 2.22
ABCA9Q8IUA7 SDHAP1-207ENST00000440850 2000 ntBASIC28.94■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms