Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.65■□□□□ 0.74
CCDC25Q86WR0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC25Q86WR0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC25Q86WR0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.64■□□□□ 0.73
CCDC25Q86WR0 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 BX276092.2-201ENST00000417668 665 ntBASIC19.63■□□□□ 0.73
CCDC25Q86WR0 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.63■□□□□ 0.73
CCDC25Q86WR0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC25Q86WR0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 MKRN4P-201ENST00000444706 1521 ntBASIC19.62■□□□□ 0.73
CCDC25Q86WR0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 MIR935-201ENST00000401179 91 ntBASIC19.62■□□□□ 0.73
CCDC25Q86WR0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 AC004911.1-201ENST00000416316 871 ntBASIC19.62■□□□□ 0.73
CCDC25Q86WR0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 AC005829.2-201ENST00000571422 1056 ntBASIC19.62■□□□□ 0.73
CCDC25Q86WR0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 AC006557.6-201ENST00000623071 864 ntBASIC19.62■□□□□ 0.73
CCDC25Q86WR0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.62■□□□□ 0.73
CCDC25Q86WR0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC25Q86WR0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms