Protein–RNA interactions for Protein: Q86U86

PBRM1, Protein polybromo-1, humanhuman

Predictions only

Length 1,689 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1Q86U86 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.57
PBRM1Q86U86 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
PBRM1Q86U86 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.57
PBRM1Q86U86 AC243591.1-201ENST00000452967 1364 ntBASIC31.13■■■□□ 2.57
PBRM1Q86U86 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 AC091607.1-201ENST00000490318 1060 ntBASIC31.13■■■□□ 2.57
PBRM1Q86U86 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PBRM1Q86U86 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PBRM1Q86U86 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
PBRM1Q86U86 ENSA-205ENST00000361532 792 ntTSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 KRT18P23-201ENST00000435622 1283 ntBASIC31.13■■■□□ 2.57
PBRM1Q86U86 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC31.13■■■□□ 2.57
PBRM1Q86U86 HOXB1-202ENST00000577092 1414 ntBASIC31.12■■■□□ 2.57
PBRM1Q86U86 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC31.12■■■□□ 2.57
PBRM1Q86U86 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC31.12■■■□□ 2.57
PBRM1Q86U86 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC31.12■■■□□ 2.57
PBRM1Q86U86 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
PBRM1Q86U86 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
PBRM1Q86U86 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
PBRM1Q86U86 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC31.11■■■□□ 2.57
PBRM1Q86U86 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PBRM1Q86U86 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PBRM1Q86U86 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PBRM1Q86U86 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
PBRM1Q86U86 AC090616.6-201ENST00000582640 721 ntBASIC31.11■■■□□ 2.57
PBRM1Q86U86 ABBA01031661.1-201ENST00000634362 1253 ntBASIC31.11■■■□□ 2.57
PBRM1Q86U86 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PBRM1Q86U86 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
PBRM1Q86U86 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PBRM1Q86U86 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
PBRM1Q86U86 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 FICD-205ENST00000552758 603 ntTSL 2 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PBRM1Q86U86 AC012676.1-201ENST00000574705 1949 ntBASIC31.1■■■□□ 2.57
PBRM1Q86U86 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC31.1■■■□□ 2.57
PBRM1Q86U86 LSM5-204ENST00000409909 740 ntTSL 2 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 AC020907.5-201ENST00000624372 1936 ntBASIC31.09■■■□□ 2.57
PBRM1Q86U86 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PBRM1Q86U86 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PBRM1Q86U86 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PBRM1Q86U86 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
PBRM1Q86U86 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PBRM1Q86U86 AC104390.1-201ENST00000555663 520 ntBASIC31.09■■■□□ 2.57
PBRM1Q86U86 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
PBRM1Q86U86 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PBRM1Q86U86 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 SDHAP1-207ENST00000440850 2000 ntBASIC31.08■■■□□ 2.57
PBRM1Q86U86 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
PBRM1Q86U86 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC31.08■■■□□ 2.57
PBRM1Q86U86 AC018712.1-201ENST00000455767 687 ntBASIC31.08■■■□□ 2.57
PBRM1Q86U86 KRT18P58-201ENST00000527480 1120 ntBASIC31.08■■■□□ 2.57
PBRM1Q86U86 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC31.08■■■□□ 2.57
PBRM1Q86U86 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
PBRM1Q86U86 KRT8P3-201ENST00000519669 1449 ntBASIC31.08■■■□□ 2.57
PBRM1Q86U86 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
PBRM1Q86U86 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC31.07■■■□□ 2.56
PBRM1Q86U86 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 TLE1-202ENST00000376484 666 ntTSL 3 BASIC31.07■■■□□ 2.56
PBRM1Q86U86 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC31.07■■■□□ 2.56
PBRM1Q86U86 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC31.07■■■□□ 2.56
PBRM1Q86U86 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC31.07■■■□□ 2.56
PBRM1Q86U86 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PBRM1Q86U86 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 ABR-217ENST00000572441 563 ntTSL 4 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PBRM1Q86U86 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PBRM1Q86U86 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 ELP6-205ENST00000439305 880 ntTSL 2 BASIC31.06■■■□□ 2.56
PBRM1Q86U86 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms