Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AC139887.3-201ENST00000568585 713 ntBASIC16.07■□□□□ 0.16
CSMD2Q7Z408 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD2Q7Z408 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CSMD2Q7Z408 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 MIR3197-201ENST00000582241 73 ntBASIC16.06■□□□□ 0.16
CSMD2Q7Z408 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 GPX1P2-201ENST00000429271 606 ntBASIC16.06■□□□□ 0.16
CSMD2Q7Z408 TERC-201ENST00000602385 541 ntBASIC16.06■□□□□ 0.16
CSMD2Q7Z408 AC112497.1-201ENST00000624824 639 ntBASIC16.06■□□□□ 0.16
CSMD2Q7Z408 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CSMD2Q7Z408 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 RPSAP43-201ENST00000402237 625 ntBASIC16.05■□□□□ 0.16
CSMD2Q7Z408 AL031284.1-201ENST00000419297 478 ntBASIC16.05■□□□□ 0.16
CSMD2Q7Z408 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSMD2Q7Z408 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AC098831.1-202ENST00000438821 336 ntBASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AC010327.4-202ENST00000591484 748 ntBASIC16.04■□□□□ 0.16
CSMD2Q7Z408 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AL157888.1-201ENST00000631930 593 ntBASIC16.04■□□□□ 0.16
CSMD2Q7Z408 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 AL391807.1-203ENST00000604392 2365 ntBASIC16.04■□□□□ 0.16
CSMD2Q7Z408 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSMD2Q7Z408 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 AC009065.1-201ENST00000564055 1225 ntBASIC16.03■□□□□ 0.16
CSMD2Q7Z408 AC074051.2-201ENST00000565115 352 ntBASIC16.03■□□□□ 0.16
CSMD2Q7Z408 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSMD2Q7Z408 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms