Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LCA10Q71F78 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LCA10Q71F78 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
LCA10Q71F78 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LCA10Q71F78 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC10.27□□□□□ -0.76
LCA10Q71F78 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
LCA10Q71F78 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
LCA10Q71F78 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.27□□□□□ -0.76
LCA10Q71F78 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.76
LCA10Q71F78 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
LCA10Q71F78 TCF3P1-201ENST00000423021 1937 ntBASIC10.27□□□□□ -0.76
LCA10Q71F78 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
LCA10Q71F78 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
LCA10Q71F78 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC10.27□□□□□ -0.77
LCA10Q71F78 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC10.27□□□□□ -0.77
LCA10Q71F78 MIR4767-201ENST00000582827 78 ntBASIC10.27□□□□□ -0.77
LCA10Q71F78 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.27□□□□□ -0.77
LCA10Q71F78 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
LCA10Q71F78 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
LCA10Q71F78 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
LCA10Q71F78 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
LCA10Q71F78 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC10.27□□□□□ -0.77
LCA10Q71F78 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 BICD1-207ENST00000551848 1962 ntBASIC10.26□□□□□ -0.77
LCA10Q71F78 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 AC080080.1-201ENST00000625121 2420 ntBASIC10.26□□□□□ -0.77
LCA10Q71F78 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 FXN-202ENST00000396364 980 ntTSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 AL136116.3-201ENST00000402907 1138 ntBASIC10.26□□□□□ -0.77
LCA10Q71F78 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 AC133561.4-201ENST00000566112 224 ntBASIC10.26□□□□□ -0.77
LCA10Q71F78 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 AC233992.3-201ENST00000607491 485 ntBASIC10.26□□□□□ -0.77
LCA10Q71F78 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.26□□□□□ -0.77
LCA10Q71F78 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LCA10Q71F78 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LCA10Q71F78 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LCA10Q71F78 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LCA10Q71F78 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LCA10Q71F78 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LCA10Q71F78 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LCA10Q71F78 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LCA10Q71F78 FP700111.2-201ENST00000619190 1892 ntBASIC10.25□□□□□ -0.77
LCA10Q71F78 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LCA10Q71F78 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
LCA10Q71F78 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LCA10Q71F78 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms