Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.8■□□□□ 0.76
FOXR1Q6PIV2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 MIR718-201ENST00000390190 70 ntBASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
FOXR1Q6PIV2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 KRT18P68-201ENST00000392293 1000 ntBASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 SOX15-203ENST00000570788 1093 ntBASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 AC100791.3-201ENST00000617619 330 ntBASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.78■□□□□ 0.76
FOXR1Q6PIV2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
FOXR1Q6PIV2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
FOXR1Q6PIV2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FOXR1Q6PIV2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
FOXR1Q6PIV2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXR1Q6PIV2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms