Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM53Q6P2H8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TMEM53Q6P2H8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 SOX15-203ENST00000570788 1093 ntBASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM53Q6P2H8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 AC084018.2-201ENST00000613093 2607 ntBASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM53Q6P2H8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms