Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 AP001271.2-201ENST00000624018 1556 ntBASIC18.3■□□□□ 0.52
RNF220Q5VTB9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RNF220Q5VTB9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 AC105036.2-201ENST00000569468 176 ntBASIC18.29■□□□□ 0.52
RNF220Q5VTB9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RNF220Q5VTB9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 CROCCP5-201ENST00000436658 830 ntBASIC18.28■□□□□ 0.52
RNF220Q5VTB9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RNF220Q5VTB9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.27■□□□□ 0.52
RNF220Q5VTB9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms