Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 TSPY12P-201ENST00000421279 868 ntBASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 UBC-206ENST00000538617 1303 ntTSL 5 BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC28.85■■■□□ 2.21
CDC42BPAQ5VT25 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 MIR662-201ENST00000384847 95 ntBASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
CDC42BPAQ5VT25 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 AP000347.1-202ENST00000435868 847 ntBASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 EMBP1-201ENST00000458200 901 ntBASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 KRT18P1-202ENST00000452408 1331 ntBASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC28.83■■■□□ 2.21
CDC42BPAQ5VT25 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 ELP6-205ENST00000439305 880 ntTSL 2 BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 LITAF-220ENST00000620789 692 ntTSL 5 BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
CDC42BPAQ5VT25 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 TSPY22P-201ENST00000427496 604 ntBASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
CDC42BPAQ5VT25 Z82202.1-201ENST00000623446 1880 ntBASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 BMF-207ENST00000559701 630 ntTSL 3 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 TK1-205ENST00000590862 642 ntTSL 3 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 AC010240.3-201ENST00000607688 395 ntBASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 TOB2P1-201ENST00000469761 992 ntBASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 AC112497.1-201ENST00000624824 639 ntBASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC28.8■■■□□ 2.2
CDC42BPAQ5VT25 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPAQ5VT25 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms