Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AL139400.1-201ENST00000366220 510 ntBASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 RBM17P3-201ENST00000417687 1192 ntBASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 TSEN15P1-201ENST00000423257 515 ntBASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 AC096582.2-201ENST00000510860 516 ntBASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 AC087641.1-201ENST00000557561 1021 ntBASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 AC114341.1-201ENST00000618070 349 ntBASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL13A1Q5TAT6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 GPR32P1-201ENST00000601788 811 ntBASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.44■■□□□ 1.02
COL13A1Q5TAT6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 AC036111.1-201ENST00000533973 1582 ntBASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
COL13A1Q5TAT6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 OR7E14P-202ENST00000530490 1290 ntBASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.42■■□□□ 1.02
COL13A1Q5TAT6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 TREX1-205ENST00000625293 1783 ntBASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 AC011840.4-201ENST00000578471 627 ntBASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL13A1Q5TAT6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.4■■□□□ 1.02
COL13A1Q5TAT6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms