Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TTC39AQ5SRH9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 AC141586.3-201ENST00000562166 1838 ntBASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 TK2-213ENST00000563369 882 ntTSL 5 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TTC39AQ5SRH9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 AC073508.3-201ENST00000619697 1419 ntBASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
TTC39AQ5SRH9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 IRX1P1-201ENST00000438849 1838 ntBASIC23.15■■□□□ 1.3
TTC39AQ5SRH9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
TTC39AQ5SRH9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
TTC39AQ5SRH9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
TTC39AQ5SRH9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
TTC39AQ5SRH9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
TTC39AQ5SRH9 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.14■■□□□ 1.29
TTC39AQ5SRH9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 AC008622.2-201ENST00000617006 1229 ntBASIC23.13■■□□□ 1.29
TTC39AQ5SRH9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms