Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.53■□□□□ 0.24
LRRK2Q5S007 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
LRRK2Q5S007 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
LRRK2Q5S007 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.52■□□□□ 0.24
LRRK2Q5S007 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.52■□□□□ 0.24
LRRK2Q5S007 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.52■□□□□ 0.24
LRRK2Q5S007 AP006288.1-201ENST00000446065 395 ntBASIC16.52■□□□□ 0.24
LRRK2Q5S007 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
LRRK2Q5S007 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LRRK2Q5S007 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LRRK2Q5S007 AC121338.2-201ENST00000622535 1744 ntBASIC16.52■□□□□ 0.23
LRRK2Q5S007 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LRRK2Q5S007 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 AC104109.2-201ENST00000602919 1418 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 KRT18P23-201ENST00000435622 1283 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 METTL21AP1-201ENST00000438852 635 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 MIR3687-2-201ENST00000577708 61 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 AL592071.1-201ENST00000611956 408 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 MIR3687-1-201ENST00000614492 61 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 ZNF259P1-201ENST00000407656 1365 ntBASIC16.51■□□□□ 0.23
LRRK2Q5S007 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LRRK2Q5S007 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.51■□□□□ 0.23
LRRK2Q5S007 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 AC244107.1-201ENST00000442033 332 ntBASIC16.5■□□□□ 0.23
LRRK2Q5S007 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRK2Q5S007 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRK2Q5S007 ERF-202ENST00000440177 2032 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRK2Q5S007 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRK2Q5S007 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms