Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 HYMAI.1-201ENST00000620949 238 ntBASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNFT1Q5M7Z0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 AP000523.1-201ENST00000398242 1049 ntBASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 AC112907.2-201ENST00000448639 330 ntBASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
RNFT1Q5M7Z0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 AL023284.2-201ENST00000405850 579 ntBASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 SPDYE15P-201ENST00000424157 909 ntBASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 AC005332.1-201ENST00000577698 1310 ntBASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 IER3-202ENST00000376377 1350 ntBASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNFT1Q5M7Z0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 Z82202.1-201ENST00000623446 1880 ntBASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 STARP1-201ENST00000397973 869 ntBASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.12■□□□□ 0.33
RNFT1Q5M7Z0 AC083849.1-201ENST00000615227 514 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms