Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 FP475955.4-201ENST00000623131 1990 ntBASIC17■□□□□ 0.31
CCDC58Q4VC31 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17■□□□□ 0.31
CCDC58Q4VC31 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17■□□□□ 0.31
CCDC58Q4VC31 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17■□□□□ 0.31
CCDC58Q4VC31 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CCDC58Q4VC31 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17■□□□□ 0.31
CCDC58Q4VC31 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCDC58Q4VC31 APTR-203ENST00000430801 583 ntTSL 5 BASIC17■□□□□ 0.31
CCDC58Q4VC31 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17■□□□□ 0.31
CCDC58Q4VC31 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC58Q4VC31 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17■□□□□ 0.31
CCDC58Q4VC31 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17■□□□□ 0.31
CCDC58Q4VC31 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
CCDC58Q4VC31 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 AC011767.1-201ENST00000617410 1153 ntBASIC17■□□□□ 0.31
CCDC58Q4VC31 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17■□□□□ 0.31
CCDC58Q4VC31 ANKRD18DP-204ENST00000455355 1975 ntBASIC17■□□□□ 0.31
CCDC58Q4VC31 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17■□□□□ 0.31
CCDC58Q4VC31 KRT17P1-201ENST00000399211 1546 ntBASIC17■□□□□ 0.31
CCDC58Q4VC31 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CCDC58Q4VC31 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17■□□□□ 0.31
CCDC58Q4VC31 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCDC58Q4VC31 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCDC58Q4VC31 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 AC073210.2-201ENST00000430369 194 ntBASIC16.99■□□□□ 0.31
CCDC58Q4VC31 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 AC104417.2-201ENST00000562989 1793 ntBASIC16.99■□□□□ 0.31
CCDC58Q4VC31 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCDC58Q4VC31 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 GPX1P1-201ENST00000388829 606 ntBASIC16.98■□□□□ 0.31
CCDC58Q4VC31 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 AC007322.1-201ENST00000426983 750 ntBASIC16.98■□□□□ 0.31
CCDC58Q4VC31 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC58Q4VC31 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC58Q4VC31 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms