Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CERKLQ49MI3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 PCED1CP-201ENST00000419887 785 ntBASIC22.29■■□□□ 1.16
CERKLQ49MI3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.29■■□□□ 1.16
CERKLQ49MI3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CERKLQ49MI3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 STARP1-201ENST00000397973 869 ntBASIC22.28■■□□□ 1.16
CERKLQ49MI3 AL023284.2-201ENST00000405850 579 ntBASIC22.28■■□□□ 1.16
CERKLQ49MI3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.28■■□□□ 1.16
CERKLQ49MI3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CERKLQ49MI3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 AC112907.2-201ENST00000448639 330 ntBASIC22.27■■□□□ 1.16
CERKLQ49MI3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 KRT8P3-201ENST00000519669 1449 ntBASIC22.27■■□□□ 1.16
CERKLQ49MI3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CERKLQ49MI3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CERKLQ49MI3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC22.27■■□□□ 1.15
CERKLQ49MI3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CERKLQ49MI3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC22.26■■□□□ 1.15
CERKLQ49MI3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CERKLQ49MI3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CERKLQ49MI3 TEX21P-204ENST00000641479 1693 ntBASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms