Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX4Q33E94 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RFX4Q33E94 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.71■□□□□ 0.43
RFX4Q33E94 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 AC133552.2-202ENST00000575694 574 ntBASIC17.71■□□□□ 0.43
RFX4Q33E94 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RFX4Q33E94 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.71■□□□□ 0.43
RFX4Q33E94 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RFX4Q33E94 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RFX4Q33E94 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFX4Q33E94 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.71■□□□□ 0.42
RFX4Q33E94 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFX4Q33E94 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
RFX4Q33E94 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFX4Q33E94 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RFX4Q33E94 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RFX4Q33E94 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.7■□□□□ 0.42
RFX4Q33E94 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
RFX4Q33E94 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RFX4Q33E94 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RFX4Q33E94 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 GPX1P1-201ENST00000388829 606 ntBASIC17.7■□□□□ 0.42
RFX4Q33E94 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.7■□□□□ 0.42
RFX4Q33E94 AC004911.1-201ENST00000416316 871 ntBASIC17.7■□□□□ 0.42
RFX4Q33E94 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.7■□□□□ 0.42
RFX4Q33E94 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
RFX4Q33E94 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.7■□□□□ 0.42
RFX4Q33E94 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.7■□□□□ 0.42
RFX4Q33E94 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RFX4Q33E94 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFX4Q33E94 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFX4Q33E94 ANO7L1-203ENST00000602586 1720 ntBASIC17.69■□□□□ 0.42
RFX4Q33E94 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RFX4Q33E94 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX4Q33E94 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX4Q33E94 OR6D1P-202ENST00000641007 5290 ntBASIC17.69■□□□□ 0.42
RFX4Q33E94 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RFX4Q33E94 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RFX4Q33E94 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.69■□□□□ 0.42
RFX4Q33E94 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RFX4Q33E94 AC022517.1-201ENST00000592429 346 ntBASIC17.69■□□□□ 0.42
RFX4Q33E94 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RFX4Q33E94 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.69■□□□□ 0.42
RFX4Q33E94 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
RFX4Q33E94 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RFX4Q33E94 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX4Q33E94 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX4Q33E94 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX4Q33E94 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RFX4Q33E94 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RFX4Q33E94 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.68■□□□□ 0.42
RFX4Q33E94 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms