Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ESRRAP1-201ENST00000400596 1257 ntBASIC12.6□□□□□ -0.39
SYCNQ0VAF6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 MTDHP1-201ENST00000605323 784 ntBASIC12.6□□□□□ -0.39
SYCNQ0VAF6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.6□□□□□ -0.39
SYCNQ0VAF6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 AL161938.1-201ENST00000569833 2180 ntBASIC12.59□□□□□ -0.39
SYCNQ0VAF6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 KRASP1-201ENST00000407852 552 ntBASIC12.59□□□□□ -0.39
SYCNQ0VAF6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 C1QL1P1-201ENST00000568105 661 ntBASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SYCNQ0VAF6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SYCNQ0VAF6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SYCNQ0VAF6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SYCNQ0VAF6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.58□□□□□ -0.39
SYCNQ0VAF6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
SYCNQ0VAF6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.58□□□□□ -0.4
SYCNQ0VAF6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms