Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC3A1Q07837 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC3A1Q07837 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 AC090164.3-201ENST00000610780 2143 ntBASIC17.1■□□□□ 0.33
SLC3A1Q07837 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC3A1Q07837 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC3A1Q07837 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 AC135050.7-201ENST00000624508 2218 ntBASIC17.09■□□□□ 0.33
SLC3A1Q07837 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC3A1Q07837 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC3A1Q07837 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SLC3A1Q07837 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SLC3A1Q07837 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC3A1Q07837 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms