Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLDN2P57739 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN2P57739 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CLDN2P57739 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLDN2P57739 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.8■□□□□ 0.6
CLDN2P57739 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN2P57739 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
CLDN2P57739 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.8■□□□□ 0.6
CLDN2P57739 KRT18P38-201ENST00000449496 1282 ntBASIC18.8■□□□□ 0.6
CLDN2P57739 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN2P57739 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.8■□□□□ 0.6
CLDN2P57739 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CLDN2P57739 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CLDN2P57739 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLDN2P57739 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
CLDN2P57739 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CLDN2P57739 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CLDN2P57739 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN2P57739 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 HOMER2P1-201ENST00000455653 964 ntBASIC18.79■□□□□ 0.6
CLDN2P57739 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN2P57739 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLDN2P57739 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN2P57739 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 Z82202.1-201ENST00000623446 1880 ntBASIC18.79■□□□□ 0.6
CLDN2P57739 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLDN2P57739 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.79■□□□□ 0.6
CLDN2P57739 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLDN2P57739 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.79■□□□□ 0.6
CLDN2P57739 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
CLDN2P57739 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN2P57739 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.78■□□□□ 0.6
CLDN2P57739 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CLDN2P57739 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN2P57739 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN2P57739 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLDN2P57739 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN2P57739 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN2P57739 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN2P57739 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN2P57739 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.78■□□□□ 0.6
CLDN2P57739 GCSHP2-201ENST00000560971 527 ntBASIC18.78■□□□□ 0.6
CLDN2P57739 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN2P57739 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.78■□□□□ 0.6
CLDN2P57739 CR769767.2-201ENST00000622735 460 ntBASIC18.78■□□□□ 0.6
CLDN2P57739 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLDN2P57739 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN2P57739 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.78■□□□□ 0.6
CLDN2P57739 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CLDN2P57739 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLDN2P57739 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLDN2P57739 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.77■□□□□ 0.6
CLDN2P57739 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.77■□□□□ 0.6
CLDN2P57739 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLDN2P57739 GPAT2P1-201ENST00000444924 1672 ntBASIC18.77■□□□□ 0.6
CLDN2P57739 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.77■□□□□ 0.6
CLDN2P57739 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms