Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 GPX1P1-201ENST00000388829 606 ntBASIC16.57■□□□□ 0.24
CLDN12P56749 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN12P56749 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 AC034268.1-201ENST00000441047 882 ntBASIC16.57■□□□□ 0.24
CLDN12P56749 AC093787.1-201ENST00000450396 207 ntBASIC16.57■□□□□ 0.24
CLDN12P56749 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN12P56749 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.57■□□□□ 0.24
CLDN12P56749 BID-214ENST00000617586 542 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN12P56749 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLDN12P56749 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLDN12P56749 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN12P56749 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CLDN12P56749 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.57■□□□□ 0.24
CLDN12P56749 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.57■□□□□ 0.24
CLDN12P56749 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.56■□□□□ 0.24
CLDN12P56749 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN12P56749 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.56■□□□□ 0.24
CLDN12P56749 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN12P56749 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 BCL2-203ENST00000589955 5011 ntBASIC16.56■□□□□ 0.24
CLDN12P56749 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 AC016769.1-201ENST00000409132 1010 ntBASIC16.56■□□□□ 0.24
CLDN12P56749 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.56■□□□□ 0.24
CLDN12P56749 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN12P56749 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLDN12P56749 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN12P56749 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.56■□□□□ 0.24
CLDN12P56749 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN12P56749 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.55■□□□□ 0.24
CLDN12P56749 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN12P56749 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.55■□□□□ 0.24
CLDN12P56749 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.55■□□□□ 0.24
CLDN12P56749 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.55■□□□□ 0.24
CLDN12P56749 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
CLDN12P56749 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CLDN12P56749 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN12P56749 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLDN12P56749 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
CLDN12P56749 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CLDN12P56749 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLDN12P56749 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN12P56749 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN12P56749 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN12P56749 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN12P56749 OR10C1-204ENST00000622521 1039 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms