Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH6P55285 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH6P55285 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH6P55285 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
CDH6P55285 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDH6P55285 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.8■□□□□ 0.76
CDH6P55285 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.8■□□□□ 0.76
CDH6P55285 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 RARRES2P10-201ENST00000564312 460 ntBASIC19.8■□□□□ 0.76
CDH6P55285 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDH6P55285 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDH6P55285 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CDH6P55285 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDH6P55285 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH6P55285 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH6P55285 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH6P55285 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDH6P55285 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH6P55285 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH6P55285 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.79■□□□□ 0.76
CDH6P55285 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.79■□□□□ 0.76
CDH6P55285 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.79■□□□□ 0.76
CDH6P55285 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDH6P55285 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDH6P55285 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CDH6P55285 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH6P55285 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH6P55285 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH6P55285 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH6P55285 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.78■□□□□ 0.76
CDH6P55285 AL158047.1-201ENST00000445918 881 ntBASIC19.78■□□□□ 0.76
CDH6P55285 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH6P55285 UBE2SP1-201ENST00000450587 669 ntBASIC19.78■□□□□ 0.76
CDH6P55285 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH6P55285 AF186192.3-201ENST00000583427 947 ntBASIC19.78■□□□□ 0.76
CDH6P55285 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH6P55285 CR392000.1-201ENST00000624770 1228 ntBASIC19.78■□□□□ 0.76
CDH6P55285 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH6P55285 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH6P55285 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CDH6P55285 AC020763.4-201ENST00000623414 4170 ntBASIC19.78■□□□□ 0.76
CDH6P55285 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH6P55285 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH6P55285 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CDH6P55285 KRT16P1-201ENST00000399124 1418 ntBASIC19.77■□□□□ 0.76
CDH6P55285 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH6P55285 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms