Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 AC134043.2-201ENST00000624206 2238 ntBASIC18.69■□□□□ 0.58
GTF2A1P52655 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 AL031598.1-201ENST00000561511 1773 ntBASIC18.69■□□□□ 0.58
GTF2A1P52655 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GTF2A1P52655 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.69■□□□□ 0.58
GTF2A1P52655 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GTF2A1P52655 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GTF2A1P52655 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GTF2A1P52655 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GTF2A1P52655 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.68■□□□□ 0.58
GTF2A1P52655 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.68■□□□□ 0.58
GTF2A1P52655 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 AL691432.2-201ENST00000607222 2038 ntBASIC18.68■□□□□ 0.58
GTF2A1P52655 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 AC010141.3-201ENST00000456659 717 ntBASIC18.68■□□□□ 0.58
GTF2A1P52655 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.68■□□□□ 0.58
GTF2A1P52655 UNC93B8-201ENST00000511903 705 ntBASIC18.68■□□□□ 0.58
GTF2A1P52655 MIR3181-201ENST00000578512 73 ntBASIC18.68■□□□□ 0.58
GTF2A1P52655 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2A1P52655 AC087239.1-201ENST00000622671 572 ntBASIC18.68■□□□□ 0.58
GTF2A1P52655 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2A1P52655 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2A1P52655 AC008741.2-201ENST00000612792 3115 ntBASIC18.68■□□□□ 0.58
GTF2A1P52655 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2A1P52655 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.68■□□□□ 0.58
GTF2A1P52655 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GTF2A1P52655 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2A1P52655 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2A1P52655 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2A1P52655 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.68■□□□□ 0.58
GTF2A1P52655 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.68■□□□□ 0.58
GTF2A1P52655 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.67■□□□□ 0.58
GTF2A1P52655 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 OR2I1P-207ENST00000453522 948 ntBASIC18.67■□□□□ 0.58
GTF2A1P52655 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.67■□□□□ 0.58
GTF2A1P52655 AC010525.1-201ENST00000585559 441 ntBASIC18.67■□□□□ 0.58
GTF2A1P52655 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GTF2A1P52655 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.67■□□□□ 0.58
GTF2A1P52655 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GTF2A1P52655 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.67■□□□□ 0.58
GTF2A1P52655 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GTF2A1P52655 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
GTF2A1P52655 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GTF2A1P52655 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GTF2A1P52655 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.67■□□□□ 0.58
GTF2A1P52655 TSPY26P-202ENST00000565928 3884 ntBASIC18.67■□□□□ 0.58
GTF2A1P52655 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GTF2A1P52655 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.66■□□□□ 0.58
GTF2A1P52655 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.66■□□□□ 0.58
GTF2A1P52655 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GTF2A1P52655 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms