Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.63■□□□□ 0.73
NEK3P51956 REXO1L10P-201ENST00000615707 1290 ntBASIC19.63■□□□□ 0.73
NEK3P51956 AL031985.4-201ENST00000642138 673 ntBASIC19.63■□□□□ 0.73
NEK3P51956 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NEK3P51956 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK3P51956 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NEK3P51956 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.63■□□□□ 0.73
NEK3P51956 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
NEK3P51956 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.62■□□□□ 0.73
NEK3P51956 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.62■□□□□ 0.73
NEK3P51956 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NEK3P51956 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NEK3P51956 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NEK3P51956 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 CROCCP3-202ENST00000420820 1947 ntBASIC19.61■□□□□ 0.73
NEK3P51956 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.61■□□□□ 0.73
NEK3P51956 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.61■□□□□ 0.73
NEK3P51956 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.61■□□□□ 0.73
NEK3P51956 AC116562.2-201ENST00000507042 360 ntBASIC19.61■□□□□ 0.73
NEK3P51956 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 AC026271.3-201ENST00000571884 352 ntBASIC19.61■□□□□ 0.73
NEK3P51956 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.61■□□□□ 0.73
NEK3P51956 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NEK3P51956 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NEK3P51956 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 KRT8P8-201ENST00000434750 1448 ntBASIC19.6■□□□□ 0.73
NEK3P51956 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NEK3P51956 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NEK3P51956 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK3P51956 UNC93B2-201ENST00000285383 730 ntBASIC19.6■□□□□ 0.73
NEK3P51956 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.6■□□□□ 0.73
NEK3P51956 RBM17P1-201ENST00000453646 1190 ntBASIC19.6■□□□□ 0.73
NEK3P51956 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NEK3P51956 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.6■□□□□ 0.73
NEK3P51956 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.6■□□□□ 0.73
NEK3P51956 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NEK3P51956 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NEK3P51956 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NEK3P51956 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NEK3P51956 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NEK3P51956 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.59■□□□□ 0.73
NEK3P51956 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
NEK3P51956 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NEK3P51956 AC211429.1-201ENST00000415277 523 ntBASIC19.59■□□□□ 0.73
NEK3P51956 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NEK3P51956 AC087499.1-201ENST00000418141 1075 ntBASIC19.59■□□□□ 0.73
NEK3P51956 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.59■□□□□ 0.73
NEK3P51956 AC131212.4-201ENST00000623606 975 ntBASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms