Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCNKAP51800 HMGA1P5-201ENST00000412453 271 ntBASIC18.67■□□□□ 0.58
CLCNKAP51800 ECEL1P2-202ENST00000465689 757 ntBASIC18.67■□□□□ 0.58
CLCNKAP51800 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCNKAP51800 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CLCNKAP51800 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
CLCNKAP51800 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.67■□□□□ 0.58
CLCNKAP51800 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLCNKAP51800 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLCNKAP51800 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 TERF1P1-201ENST00000311003 1181 ntBASIC18.66■□□□□ 0.58
CLCNKAP51800 INGX-201ENST00000359239 846 ntBASIC18.66■□□□□ 0.58
CLCNKAP51800 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CLCNKAP51800 AC005521.1-201ENST00000393351 872 ntBASIC18.66■□□□□ 0.58
CLCNKAP51800 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCNKAP51800 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.66■□□□□ 0.58
CLCNKAP51800 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCNKAP51800 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.66■□□□□ 0.58
CLCNKAP51800 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLCNKAP51800 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CLCNKAP51800 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CLCNKAP51800 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLCNKAP51800 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCNKAP51800 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCNKAP51800 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CLCNKAP51800 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCNKAP51800 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
CLCNKAP51800 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 AL137013.1-201ENST00000432946 1228 ntBASIC18.65■□□□□ 0.58
CLCNKAP51800 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.65■□□□□ 0.58
CLCNKAP51800 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.65■□□□□ 0.58
CLCNKAP51800 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.65■□□□□ 0.58
CLCNKAP51800 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CLCNKAP51800 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CLCNKAP51800 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLCNKAP51800 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.65■□□□□ 0.58
CLCNKAP51800 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CLCNKAP51800 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.65■□□□□ 0.58
CLCNKAP51800 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLCNKAP51800 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CLCNKAP51800 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CLCNKAP51800 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCNKAP51800 TEX21P-204ENST00000641479 1693 ntBASIC18.64■□□□□ 0.57
CLCNKAP51800 AL032819.2-201ENST00000624543 2162 ntBASIC18.64■□□□□ 0.57
CLCNKAP51800 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLCNKAP51800 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CLCNKAP51800 KRT18P21-201ENST00000515767 1272 ntBASIC18.64■□□□□ 0.57
CLCNKAP51800 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.64■□□□□ 0.57
CLCNKAP51800 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.64■□□□□ 0.57
CLCNKAP51800 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLCNKAP51800 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLCNKAP51800 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLCNKAP51800 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCNKAP51800 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.63■□□□□ 0.57
CLCNKAP51800 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLCNKAP51800 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms