Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.18■□□□□ 0.82
PSEN1P49768 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.18■□□□□ 0.82
PSEN1P49768 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.18■□□□□ 0.82
PSEN1P49768 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.18■□□□□ 0.82
PSEN1P49768 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 ZNF815P-204ENST00000434898 1737 ntBASIC20.18■□□□□ 0.82
PSEN1P49768 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PSEN1P49768 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.17■□□□□ 0.82
PSEN1P49768 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC20.17■□□□□ 0.82
PSEN1P49768 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.17■□□□□ 0.82
PSEN1P49768 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-206ENST00000376090 689 ntTSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-209ENST00000376096 565 ntTSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-210ENST00000376099 610 ntTSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 MIR1238-201ENST00000408483 83 ntBASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-214ENST00000418507 726 ntTSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 AC091390.4-202ENST00000476426 537 ntBASIC20.17■□□□□ 0.82
PSEN1P49768 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.17■□□□□ 0.82
PSEN1P49768 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.17■□□□□ 0.82
PSEN1P49768 LINC01023-201ENST00000606054 436 ntBASIC20.17■□□□□ 0.82
PSEN1P49768 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSEN1P49768 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.17■□□□□ 0.82
PSEN1P49768 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.16■□□□□ 0.82
PSEN1P49768 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.16■□□□□ 0.82
PSEN1P49768 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PSEN1P49768 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.16■□□□□ 0.82
PSEN1P49768 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.16■□□□□ 0.82
PSEN1P49768 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
PSEN1P49768 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 AC097488.1-201ENST00000507834 756 ntBASIC20.16■□□□□ 0.82
PSEN1P49768 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.16■□□□□ 0.82
PSEN1P49768 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.16■□□□□ 0.82
PSEN1P49768 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
PSEN1P49768 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.16■□□□□ 0.82
PSEN1P49768 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.16■□□□□ 0.82
PSEN1P49768 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSEN1P49768 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
PSEN1P49768 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.15■□□□□ 0.82
PSEN1P49768 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.15■□□□□ 0.82
PSEN1P49768 AC211429.1-201ENST00000415277 523 ntBASIC20.15■□□□□ 0.82
PSEN1P49768 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.15■□□□□ 0.82
PSEN1P49768 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.15■□□□□ 0.82
PSEN1P49768 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.15■□□□□ 0.82
PSEN1P49768 AC096733.2-201ENST00000609937 1394 ntBASIC20.15■□□□□ 0.82
PSEN1P49768 KRT8P41-201ENST00000533985 1514 ntBASIC20.15■□□□□ 0.82
PSEN1P49768 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
PSEN1P49768 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.15■□□□□ 0.82
PSEN1P49768 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.15■□□□□ 0.82
PSEN1P49768 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.15■□□□□ 0.82
PSEN1P49768 AC104417.2-201ENST00000562989 1793 ntBASIC20.15■□□□□ 0.82
PSEN1P49768 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.15■□□□□ 0.82
PSEN1P49768 LINC01465-201ENST00000408887 1940 ntBASIC20.15■□□□□ 0.82
PSEN1P49768 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
PSEN1P49768 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSEN1P49768 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.14■□□□□ 0.82
PSEN1P49768 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PSEN1P49768 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.14■□□□□ 0.81
PSEN1P49768 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PSEN1P49768 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PSEN1P49768 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PSEN1P49768 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.14■□□□□ 0.81
PSEN1P49768 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms