Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PRIM2P49643 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.11■□□□□ 0.49
PRIM2P49643 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.11■□□□□ 0.49
PRIM2P49643 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PRIM2P49643 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PRIM2P49643 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.11■□□□□ 0.49
PRIM2P49643 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PRIM2P49643 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PRIM2P49643 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.1■□□□□ 0.49
PRIM2P49643 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
PRIM2P49643 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PRIM2P49643 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.1■□□□□ 0.49
PRIM2P49643 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.1■□□□□ 0.49
PRIM2P49643 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.1■□□□□ 0.49
PRIM2P49643 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.1■□□□□ 0.49
PRIM2P49643 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.1■□□□□ 0.49
PRIM2P49643 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.1■□□□□ 0.49
PRIM2P49643 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.1■□□□□ 0.49
PRIM2P49643 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PRIM2P49643 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.1■□□□□ 0.49
PRIM2P49643 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRIM2P49643 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 OR6D1P-202ENST00000641007 5290 ntBASIC18.09■□□□□ 0.49
PRIM2P49643 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PRIM2P49643 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.09■□□□□ 0.49
PRIM2P49643 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.09■□□□□ 0.49
PRIM2P49643 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.09■□□□□ 0.49
PRIM2P49643 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.09■□□□□ 0.49
PRIM2P49643 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.09■□□□□ 0.49
PRIM2P49643 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRIM2P49643 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRIM2P49643 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.08■□□□□ 0.49
PRIM2P49643 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRIM2P49643 NBPF21P-201ENST00000425093 1451 ntBASIC18.08■□□□□ 0.49
PRIM2P49643 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PRIM2P49643 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.08■□□□□ 0.49
PRIM2P49643 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.08■□□□□ 0.49
PRIM2P49643 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRIM2P49643 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.08■□□□□ 0.48
PRIM2P49643 AL138781.2-201ENST00000617896 1843 ntBASIC18.08■□□□□ 0.48
PRIM2P49643 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms