Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.95■□□□□ 0.3
CSNK1A1P48729 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 AC020763.4-201ENST00000623414 4170 ntBASIC16.95■□□□□ 0.3
CSNK1A1P48729 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1A1P48729 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CSNK1A1P48729 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 RPS2P55-201ENST00000397318 883 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AC004951.3-201ENST00000418645 1148 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AC012618.2-201ENST00000428058 849 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 TSPY23P-201ENST00000440136 739 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AC107956.1-201ENST00000494359 873 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 CD177P1-201ENST00000606252 935 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AP000974.1-201ENST00000623909 2387 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1A1P48729 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1A1P48729 RCC2P6-201ENST00000526625 1557 ntBASIC16.94■□□□□ 0.3
CSNK1A1P48729 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.93■□□□□ 0.3
CSNK1A1P48729 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSNK1A1P48729 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 FEM1AP3-201ENST00000403722 1741 ntBASIC16.93■□□□□ 0.3
CSNK1A1P48729 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CSNK1A1P48729 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CSNK1A1P48729 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CSNK1A1P48729 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms