Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC3P40938 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.42■□□□□ 0.38
RFC3P40938 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.42■□□□□ 0.38
RFC3P40938 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.42■□□□□ 0.38
RFC3P40938 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RFC3P40938 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RFC3P40938 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.42■□□□□ 0.38
RFC3P40938 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.42■□□□□ 0.38
RFC3P40938 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RFC3P40938 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC3P40938 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RFC3P40938 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
RFC3P40938 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC3P40938 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.41■□□□□ 0.38
RFC3P40938 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 AC139887.4-201ENST00000607877 719 ntBASIC17.41■□□□□ 0.38
RFC3P40938 AL023803.3-201ENST00000615559 522 ntBASIC17.41■□□□□ 0.38
RFC3P40938 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RFC3P40938 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.41■□□□□ 0.38
RFC3P40938 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RFC3P40938 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.41■□□□□ 0.38
RFC3P40938 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
RFC3P40938 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFC3P40938 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.4■□□□□ 0.38
RFC3P40938 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RFC3P40938 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RFC3P40938 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RFC3P40938 AK4P3-201ENST00000418260 669 ntBASIC17.4■□□□□ 0.38
RFC3P40938 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC3P40938 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
RFC3P40938 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.4■□□□□ 0.38
RFC3P40938 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.4■□□□□ 0.38
RFC3P40938 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFC3P40938 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RFC3P40938 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFC3P40938 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.39■□□□□ 0.37
RFC3P40938 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC3P40938 AC117947.1-201ENST00000427448 529 ntBASIC17.39■□□□□ 0.37
RFC3P40938 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.39■□□□□ 0.37
RFC3P40938 TSPY17P-201ENST00000450329 467 ntBASIC17.39■□□□□ 0.37
RFC3P40938 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.39■□□□□ 0.37
RFC3P40938 AP003041.3-201ENST00000527151 707 ntBASIC17.39■□□□□ 0.37
RFC3P40938 AL353719.1-201ENST00000566847 864 ntBASIC17.39■□□□□ 0.37
RFC3P40938 AC087388.1-201ENST00000571370 1112 ntBASIC17.39■□□□□ 0.37
RFC3P40938 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.39■□□□□ 0.37
RFC3P40938 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.39■□□□□ 0.37
RFC3P40938 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms