Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN7P35236 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN7P35236 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTPN7P35236 NEFHP1-201ENST00000412845 2629 ntBASIC19.7■□□□□ 0.74
PTPN7P35236 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN7P35236 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTPN7P35236 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN7P35236 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN7P35236 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.7■□□□□ 0.74
PTPN7P35236 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PTPN7P35236 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.7■□□□□ 0.74
PTPN7P35236 KRT18P6-201ENST00000555540 1265 ntBASIC19.7■□□□□ 0.74
PTPN7P35236 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN7P35236 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 AC124016.1-201ENST00000609552 612 ntBASIC19.7■□□□□ 0.74
PTPN7P35236 AL023875.1-201ENST00000640777 796 ntBASIC19.7■□□□□ 0.74
PTPN7P35236 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN7P35236 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.7■□□□□ 0.74
PTPN7P35236 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTPN7P35236 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.7■□□□□ 0.74
PTPN7P35236 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN7P35236 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN7P35236 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN7P35236 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PTPN7P35236 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PTPN7P35236 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTPN7P35236 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.69■□□□□ 0.74
PTPN7P35236 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTPN7P35236 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTPN7P35236 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN7P35236 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN7P35236 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.68■□□□□ 0.74
PTPN7P35236 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.68■□□□□ 0.74
PTPN7P35236 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.68■□□□□ 0.74
PTPN7P35236 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTPN7P35236 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN7P35236 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.68■□□□□ 0.74
PTPN7P35236 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPN7P35236 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTPN7P35236 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 AC079598.2-202ENST00000546624 1451 ntBASIC19.67■□□□□ 0.74
PTPN7P35236 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN7P35236 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PTPN7P35236 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN7P35236 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN7P35236 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN7P35236 RN7SL471P-201ENST00000580476 299 ntBASIC19.67■□□□□ 0.74
PTPN7P35236 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN7P35236 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.67■□□□□ 0.74
PTPN7P35236 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.67■□□□□ 0.74
PTPN7P35236 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.67■□□□□ 0.74
PTPN7P35236 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PTPN7P35236 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTPN7P35236 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms