Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GABRB3P28472 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRB3P28472 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
GABRB3P28472 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.92■□□□□ 0.62
GABRB3P28472 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRB3P28472 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.92■□□□□ 0.62
GABRB3P28472 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.92■□□□□ 0.62
GABRB3P28472 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRB3P28472 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
GABRB3P28472 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.92■□□□□ 0.62
GABRB3P28472 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.92■□□□□ 0.62
GABRB3P28472 CD99P1-205ENST00000527459 561 ntBASIC18.92■□□□□ 0.62
GABRB3P28472 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.92■□□□□ 0.62
GABRB3P28472 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRB3P28472 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
GABRB3P28472 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.92■□□□□ 0.62
GABRB3P28472 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GABRB3P28472 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.91■□□□□ 0.62
GABRB3P28472 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GABRB3P28472 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GABRB3P28472 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.91■□□□□ 0.62
GABRB3P28472 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.91■□□□□ 0.62
GABRB3P28472 AC004980.1-204ENST00000429707 299 ntBASIC18.91■□□□□ 0.62
GABRB3P28472 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.91■□□□□ 0.62
GABRB3P28472 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
GABRB3P28472 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.91■□□□□ 0.62
GABRB3P28472 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.91■□□□□ 0.62
GABRB3P28472 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
GABRB3P28472 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 AC005082.1-201ENST00000413042 2259 ntBASIC18.9■□□□□ 0.62
GABRB3P28472 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.9■□□□□ 0.62
GABRB3P28472 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 NIFKP9-201ENST00000419265 221 ntBASIC18.9■□□□□ 0.62
GABRB3P28472 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 RPS2P4-201ENST00000476944 856 ntBASIC18.9■□□□□ 0.62
GABRB3P28472 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.9■□□□□ 0.62
GABRB3P28472 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
GABRB3P28472 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.9■□□□□ 0.62
GABRB3P28472 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GABRB3P28472 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
GABRB3P28472 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.89■□□□□ 0.62
GABRB3P28472 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GABRB3P28472 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.89■□□□□ 0.61
GABRB3P28472 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GABRB3P28472 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.89■□□□□ 0.61
GABRB3P28472 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms