Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APCP25054 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APCP25054 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.04■□□□□ 0.16
APCP25054 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APCP25054 GPX1P2-201ENST00000429271 606 ntBASIC16.04■□□□□ 0.16
APCP25054 AC091607.1-201ENST00000490318 1060 ntBASIC16.04■□□□□ 0.16
APCP25054 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.04■□□□□ 0.16
APCP25054 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.04■□□□□ 0.16
APCP25054 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APCP25054 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APCP25054 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.03■□□□□ 0.16
APCP25054 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.03■□□□□ 0.16
APCP25054 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
APCP25054 BNIP3P18-201ENST00000593976 575 ntBASIC16.03■□□□□ 0.16
APCP25054 AL390719.2-201ENST00000606993 987 ntBASIC16.03■□□□□ 0.16
APCP25054 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.03■□□□□ 0.16
APCP25054 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
APCP25054 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APCP25054 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
APCP25054 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.03■□□□□ 0.16
APCP25054 AC004967.1-201ENST00000453589 447 ntBASIC16.03■□□□□ 0.16
APCP25054 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.03■□□□□ 0.16
APCP25054 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APCP25054 AC112497.1-201ENST00000624824 639 ntBASIC16.03■□□□□ 0.16
APCP25054 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.03■□□□□ 0.16
APCP25054 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.02■□□□□ 0.16
APCP25054 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.02■□□□□ 0.16
APCP25054 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.02■□□□□ 0.16
APCP25054 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.02■□□□□ 0.16
APCP25054 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.02■□□□□ 0.16
APCP25054 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.02■□□□□ 0.16
APCP25054 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.02■□□□□ 0.16
APCP25054 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.02■□□□□ 0.16
APCP25054 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APCP25054 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.02■□□□□ 0.16
APCP25054 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.02■□□□□ 0.15
APCP25054 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.02■□□□□ 0.15
APCP25054 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.02■□□□□ 0.15
APCP25054 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.02■□□□□ 0.15
APCP25054 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.02■□□□□ 0.15
APCP25054 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APCP25054 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.01■□□□□ 0.15
APCP25054 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.01■□□□□ 0.15
APCP25054 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
APCP25054 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
APCP25054 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 HNRNPDP1-201ENST00000439535 754 ntBASIC16.01■□□□□ 0.15
APCP25054 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.01■□□□□ 0.15
APCP25054 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.01■□□□□ 0.15
APCP25054 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
APCP25054 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
APCP25054 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.01■□□□□ 0.15
APCP25054 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
APCP25054 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.01■□□□□ 0.15
APCP25054 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.01■□□□□ 0.15
APCP25054 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APCP25054 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
APCP25054 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms