Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 KRT17P6-201ENST00000453795 1220 ntBASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 MIR3180-5-201ENST00000583743 153 ntBASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 AL157888.1-201ENST00000631930 593 ntBASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC25.23■■□□□ 1.63
CSB-PGBD3P0DP91 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 CHCHD2P8-201ENST00000429873 447 ntBASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 SEC1P-202ENST00000473944 940 ntBASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 IFNL4P1-201ENST00000607083 540 ntBASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 AL162377.1-201ENST00000618844 1793 ntBASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CSB-PGBD3P0DP91 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 NUS1P1-201ENST00000446295 882 ntBASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CSB-PGBD3P0DP91 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CSB-PGBD3P0DP91 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
CSB-PGBD3P0DP91 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CSB-PGBD3P0DP91 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC25.2■■□□□ 1.63
CSB-PGBD3P0DP91 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 AC093525.10-201ENST00000625130 1569 ntBASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 AL136038.4-201ENST00000603606 1261 ntBASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 WDR6-223ENST00000627177 207 ntTSL 2 BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CSB-PGBD3P0DP91 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 TSPY22P-201ENST00000427496 604 ntBASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 AL732292.2-201ENST00000609649 430 ntBASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 AC112497.1-201ENST00000624824 639 ntBASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC25.19■■□□□ 1.62
CSB-PGBD3P0DP91 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 HLA-F-220ENST00000434407 884 ntBASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 TBCB-205ENST00000585746 875 ntTSL 3 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CSB-PGBD3P0DP91 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CSB-PGBD3P0DP91 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms