Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
UBCP0CG48 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.26
UBCP0CG48 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.26
UBCP0CG48 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBCP0CG48 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
UBCP0CG48 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.7■□□□□ 0.26
UBCP0CG48 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.7■□□□□ 0.26
UBCP0CG48 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.7■□□□□ 0.26
UBCP0CG48 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.7■□□□□ 0.26
UBCP0CG48 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
UBCP0CG48 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
UBCP0CG48 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.7■□□□□ 0.26
UBCP0CG48 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
UBCP0CG48 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.69■□□□□ 0.26
UBCP0CG48 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.69■□□□□ 0.26
UBCP0CG48 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
UBCP0CG48 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
UBCP0CG48 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
UBCP0CG48 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.69■□□□□ 0.26
UBCP0CG48 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.69■□□□□ 0.26
UBCP0CG48 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.69■□□□□ 0.26
UBCP0CG48 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.69■□□□□ 0.26
UBCP0CG48 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.69■□□□□ 0.26
UBCP0CG48 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.69■□□□□ 0.26
UBCP0CG48 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
UBCP0CG48 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBCP0CG48 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBCP0CG48 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.68■□□□□ 0.26
UBCP0CG48 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBCP0CG48 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBCP0CG48 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.68■□□□□ 0.26
UBCP0CG48 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 SOX15-203ENST00000570788 1093 ntBASIC16.68■□□□□ 0.26
UBCP0CG48 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
UBCP0CG48 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBCP0CG48 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBCP0CG48 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
UBCP0CG48 AL512353.2-201ENST00000448759 1962 ntBASIC16.68■□□□□ 0.26
UBCP0CG48 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
UBCP0CG48 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.67■□□□□ 0.26
UBCP0CG48 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBCP0CG48 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms