Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.36■□□□□ 0.53
RPSAP08865 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.36■□□□□ 0.53
RPSAP08865 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.36■□□□□ 0.53
RPSAP08865 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPSAP08865 AC011676.5-201ENST00000624864 2660 ntBASIC18.36■□□□□ 0.53
RPSAP08865 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPSAP08865 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RPSAP08865 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RPSAP08865 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.36■□□□□ 0.53
RPSAP08865 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
RPSAP08865 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RPSAP08865 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
RPSAP08865 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.35■□□□□ 0.53
RPSAP08865 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RPSAP08865 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
RPSAP08865 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.35■□□□□ 0.53
RPSAP08865 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.35■□□□□ 0.53
RPSAP08865 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPSAP08865 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RPSAP08865 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
RPSAP08865 PCDH8P1-201ENST00000428983 2773 ntBASIC18.35■□□□□ 0.53
RPSAP08865 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.35■□□□□ 0.53
RPSAP08865 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RPSAP08865 NKILA-202ENST00000614771 2598 ntBASIC18.35■□□□□ 0.53
RPSAP08865 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 AC009237.3-201ENST00000393279 1427 ntBASIC18.34■□□□□ 0.53
RPSAP08865 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.34■□□□□ 0.53
RPSAP08865 SLC47A1P1-202ENST00000449666 945 ntBASIC18.34■□□□□ 0.53
RPSAP08865 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.34■□□□□ 0.53
RPSAP08865 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPSAP08865 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPSAP08865 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RPSAP08865 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
RPSAP08865 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RPSAP08865 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
RPSAP08865 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RPSAP08865 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPSAP08865 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPSAP08865 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPSAP08865 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.33■□□□□ 0.52
RPSAP08865 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RPSAP08865 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.33■□□□□ 0.52
RPSAP08865 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPSAP08865 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms