Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC104417.2-201ENST00000562989 1793 ntBASIC18.73■□□□□ 0.59
CAPN1P07384 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CAPN1P07384 ECEL1P3-201ENST00000427961 737 ntBASIC18.73■□□□□ 0.59
CAPN1P07384 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.73■□□□□ 0.59
CAPN1P07384 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.73■□□□□ 0.59
CAPN1P07384 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.73■□□□□ 0.59
CAPN1P07384 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.73■□□□□ 0.59
CAPN1P07384 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.73■□□□□ 0.59
CAPN1P07384 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CAPN1P07384 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.73■□□□□ 0.59
CAPN1P07384 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.73■□□□□ 0.59
CAPN1P07384 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.73■□□□□ 0.59
CAPN1P07384 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CAPN1P07384 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.73■□□□□ 0.59
CAPN1P07384 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAPN1P07384 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
CAPN1P07384 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CAPN1P07384 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CAPN1P07384 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.73■□□□□ 0.59
CAPN1P07384 SDHAP1-207ENST00000440850 2000 ntBASIC18.73■□□□□ 0.59
CAPN1P07384 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CAPN1P07384 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CAPN1P07384 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CAPN1P07384 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CAPN1P07384 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN1P07384 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CAPN1P07384 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CAPN1P07384 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN1P07384 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN1P07384 AL355075.4-201ENST00000554988 638 ntBASIC18.72■□□□□ 0.59
CAPN1P07384 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN1P07384 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN1P07384 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CAPN1P07384 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.72■□□□□ 0.59
CAPN1P07384 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CAPN1P07384 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CAPN1P07384 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN1P07384 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CAPN1P07384 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN1P07384 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN1P07384 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN1P07384 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CAPN1P07384 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CAPN1P07384 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CAPN1P07384 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.71■□□□□ 0.59
CAPN1P07384 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN1P07384 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN1P07384 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.7■□□□□ 0.58
CAPN1P07384 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN1P07384 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN1P07384 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN1P07384 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms