Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 MYC-209ENST00000641252 345 ntBASIC17.12■□□□□ 0.33
HLA-DPB1P04440 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HLA-DPB1P04440 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 AC083880.1-201ENST00000608266 535 ntBASIC17.11■□□□□ 0.33
HLA-DPB1P04440 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 FP475955.4-201ENST00000623131 1990 ntBASIC17.11■□□□□ 0.33
HLA-DPB1P04440 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HLA-DPB1P04440 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 AC073210.2-201ENST00000430369 194 ntBASIC17.1■□□□□ 0.33
HLA-DPB1P04440 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HLA-DPB1P04440 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.09■□□□□ 0.33
HLA-DPB1P04440 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms