Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.68■□□□□ 0.58
CPNE6O95741 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE6O95741 CCR12P-201ENST00000446203 998 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 AC104076.2-201ENST00000448912 469 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.68■□□□□ 0.58
CPNE6O95741 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 AC091390.4-202ENST00000476426 537 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE6O95741 AL160286.2-201ENST00000567150 934 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 FAM87A-204ENST00000613235 858 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CPNE6O95741 AC093503.3-201ENST00000624917 2352 ntBASIC18.68■□□□□ 0.58
CPNE6O95741 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CPNE6O95741 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.68■□□□□ 0.58
CPNE6O95741 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CPNE6O95741 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE6O95741 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE6O95741 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE6O95741 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE6O95741 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CPNE6O95741 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.67■□□□□ 0.58
CPNE6O95741 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CPNE6O95741 SLC25A1P2-201ENST00000430693 912 ntBASIC18.67■□□□□ 0.58
CPNE6O95741 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.67■□□□□ 0.58
CPNE6O95741 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.67■□□□□ 0.58
CPNE6O95741 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CPNE6O95741 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
CPNE6O95741 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.67■□□□□ 0.58
CPNE6O95741 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE6O95741 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CPNE6O95741 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE6O95741 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CPNE6O95741 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE6O95741 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CPNE6O95741 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CPNE6O95741 HMGA1P5-201ENST00000412453 271 ntBASIC18.66■□□□□ 0.58
CPNE6O95741 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.66■□□□□ 0.58
CPNE6O95741 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.66■□□□□ 0.58
CPNE6O95741 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.66■□□□□ 0.58
CPNE6O95741 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.66■□□□□ 0.58
CPNE6O95741 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
CPNE6O95741 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE6O95741 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.66■□□□□ 0.58
CPNE6O95741 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CPNE6O95741 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CPNE6O95741 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CPNE6O95741 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPNE6O95741 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CPNE6O95741 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE6O95741 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CPNE6O95741 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CPNE6O95741 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 INGX-201ENST00000359239 846 ntBASIC18.65■□□□□ 0.58
CPNE6O95741 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE6O95741 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.65■□□□□ 0.58
CPNE6O95741 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPNE6O95741 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CPNE6O95741 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.65■□□□□ 0.58
CPNE6O95741 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms