Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.62■□□□□ 0.25
UPK1BO75841 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
UPK1BO75841 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
UPK1BO75841 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.62■□□□□ 0.25
UPK1BO75841 ZNF815P-204ENST00000434898 1737 ntBASIC16.62■□□□□ 0.25
UPK1BO75841 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.61■□□□□ 0.25
UPK1BO75841 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
UPK1BO75841 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 SERBP1P1-201ENST00000396021 1160 ntBASIC16.61■□□□□ 0.25
UPK1BO75841 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.61■□□□□ 0.25
UPK1BO75841 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.61■□□□□ 0.25
UPK1BO75841 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.61■□□□□ 0.25
UPK1BO75841 AL356652.1-201ENST00000615962 565 ntBASIC16.61■□□□□ 0.25
UPK1BO75841 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.61■□□□□ 0.25
UPK1BO75841 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UPK1BO75841 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UPK1BO75841 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UPK1BO75841 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
UPK1BO75841 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 AL162727.3-201ENST00000635661 2787 ntBASIC16.6■□□□□ 0.25
UPK1BO75841 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.6■□□□□ 0.25
UPK1BO75841 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 PGM5P4-201ENST00000421970 445 ntBASIC16.6■□□□□ 0.25
UPK1BO75841 SRD5A1P1-201ENST00000442297 786 ntBASIC16.6■□□□□ 0.25
UPK1BO75841 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC16.6■□□□□ 0.25
UPK1BO75841 AC120498.10-201ENST00000621827 505 ntBASIC16.6■□□□□ 0.25
UPK1BO75841 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
UPK1BO75841 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
UPK1BO75841 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.6■□□□□ 0.25
UPK1BO75841 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 KRT8P20-201ENST00000423953 1409 ntBASIC16.6■□□□□ 0.25
UPK1BO75841 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UPK1BO75841 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.6■□□□□ 0.25
UPK1BO75841 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
UPK1BO75841 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.59■□□□□ 0.25
UPK1BO75841 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.59■□□□□ 0.25
UPK1BO75841 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UPK1BO75841 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms