Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SUPT3HO75486 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SUPT3HO75486 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SUPT3HO75486 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.86■□□□□ 0.61
SUPT3HO75486 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
SUPT3HO75486 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.86■□□□□ 0.61
SUPT3HO75486 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.86■□□□□ 0.61
SUPT3HO75486 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.86■□□□□ 0.61
SUPT3HO75486 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SUPT3HO75486 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SUPT3HO75486 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.86■□□□□ 0.61
SUPT3HO75486 NEFHP1-201ENST00000412845 2629 ntBASIC18.86■□□□□ 0.61
SUPT3HO75486 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SUPT3HO75486 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SUPT3HO75486 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 AC006333.2-201ENST00000607957 2099 ntBASIC18.85■□□□□ 0.61
SUPT3HO75486 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SUPT3HO75486 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SUPT3HO75486 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.85■□□□□ 0.61
SUPT3HO75486 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.85■□□□□ 0.61
SUPT3HO75486 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.85■□□□□ 0.61
SUPT3HO75486 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.85■□□□□ 0.61
SUPT3HO75486 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.85■□□□□ 0.61
SUPT3HO75486 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.85■□□□□ 0.61
SUPT3HO75486 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SUPT3HO75486 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.85■□□□□ 0.61
SUPT3HO75486 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.85■□□□□ 0.61
SUPT3HO75486 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.85■□□□□ 0.61
SUPT3HO75486 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SUPT3HO75486 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 AP003097.1-201ENST00000530657 1135 ntBASIC18.84■□□□□ 0.61
SUPT3HO75486 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.84■□□□□ 0.61
SUPT3HO75486 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.84■□□□□ 0.61
SUPT3HO75486 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SUPT3HO75486 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SUPT3HO75486 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.84■□□□□ 0.61
SUPT3HO75486 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
SUPT3HO75486 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.83■□□□□ 0.61
SUPT3HO75486 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
SUPT3HO75486 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.83■□□□□ 0.61
SUPT3HO75486 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SUPT3HO75486 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.83■□□□□ 0.61
SUPT3HO75486 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SUPT3HO75486 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.83■□□□□ 0.6
SUPT3HO75486 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SUPT3HO75486 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms