Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.63■□□□□ 0.73
TSPAN3O60637 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TSPAN3O60637 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TSPAN3O60637 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.62■□□□□ 0.73
TSPAN3O60637 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 CA15P1-201ENST00000481698 905 ntBASIC19.62■□□□□ 0.73
TSPAN3O60637 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
TSPAN3O60637 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.62■□□□□ 0.73
TSPAN3O60637 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TSPAN3O60637 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TSPAN3O60637 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
TSPAN3O60637 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TSPAN3O60637 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN3O60637 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TSPAN3O60637 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN3O60637 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.61■□□□□ 0.73
TSPAN3O60637 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN3O60637 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.61■□□□□ 0.73
TSPAN3O60637 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.61■□□□□ 0.73
TSPAN3O60637 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN3O60637 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TSPAN3O60637 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.61■□□□□ 0.73
TSPAN3O60637 AC104076.2-201ENST00000448912 469 ntBASIC19.61■□□□□ 0.73
TSPAN3O60637 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TSPAN3O60637 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.61■□□□□ 0.73
TSPAN3O60637 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.61■□□□□ 0.73
TSPAN3O60637 AC010653.2-201ENST00000623505 997 ntBASIC19.61■□□□□ 0.73
TSPAN3O60637 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
TSPAN3O60637 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.61■□□□□ 0.73
TSPAN3O60637 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.61■□□□□ 0.73
TSPAN3O60637 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TSPAN3O60637 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.6■□□□□ 0.73
TSPAN3O60637 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TSPAN3O60637 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.6■□□□□ 0.73
TSPAN3O60637 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.6■□□□□ 0.73
TSPAN3O60637 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.6■□□□□ 0.73
TSPAN3O60637 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
TSPAN3O60637 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.6■□□□□ 0.73
TSPAN3O60637 AL049597.2-201ENST00000565575 961 ntBASIC19.6■□□□□ 0.73
TSPAN3O60637 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.6■□□□□ 0.73
TSPAN3O60637 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.6■□□□□ 0.73
TSPAN3O60637 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TSPAN3O60637 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TSPAN3O60637 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.6■□□□□ 0.73
TSPAN3O60637 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.6■□□□□ 0.73
TSPAN3O60637 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
TSPAN3O60637 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TSPAN3O60637 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TSPAN3O60637 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN3O60637 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TSPAN3O60637 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN3O60637 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN3O60637 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.59■□□□□ 0.73
TSPAN3O60637 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
TSPAN3O60637 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.59■□□□□ 0.73
TSPAN3O60637 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN3O60637 AL445228.2-201ENST00000605589 952 ntBASIC19.59■□□□□ 0.73
TSPAN3O60637 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TSPAN3O60637 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.59■□□□□ 0.73
TSPAN3O60637 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.59■□□□□ 0.73
TSPAN3O60637 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN3O60637 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN3O60637 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TSPAN3O60637 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.59■□□□□ 0.73
TSPAN3O60637 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TSPAN3O60637 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TSPAN3O60637 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TSPAN3O60637 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TSPAN3O60637 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TSPAN3O60637 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TSPAN3O60637 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms