Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SSSCA1O60232 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SSSCA1O60232 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SSSCA1O60232 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 ANO7L1-203ENST00000602586 1720 ntBASIC15.54■□□□□ 0.08
SSSCA1O60232 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.54■□□□□ 0.08
SSSCA1O60232 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.54■□□□□ 0.08
SSSCA1O60232 KRT18P61-201ENST00000585825 1298 ntBASIC15.54■□□□□ 0.08
SSSCA1O60232 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 ABALON-201ENST00000629058 1903 ntBASIC15.54■□□□□ 0.08
SSSCA1O60232 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.54■□□□□ 0.08
SSSCA1O60232 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SSSCA1O60232 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SSSCA1O60232 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.53■□□□□ 0.08
SSSCA1O60232 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SSSCA1O60232 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.53■□□□□ 0.08
SSSCA1O60232 AC067852.2-201ENST00000590513 2313 ntBASIC15.53■□□□□ 0.08
SSSCA1O60232 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.53■□□□□ 0.08
SSSCA1O60232 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.53■□□□□ 0.08
SSSCA1O60232 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.53■□□□□ 0.08
SSSCA1O60232 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.53■□□□□ 0.08
SSSCA1O60232 C2orf69P4-201ENST00000565394 541 ntBASIC15.53■□□□□ 0.08
SSSCA1O60232 CYP2T3P-201ENST00000601990 817 ntBASIC15.53■□□□□ 0.08
SSSCA1O60232 AL139246.5-201ENST00000606645 996 ntBASIC15.53■□□□□ 0.08
SSSCA1O60232 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
SSSCA1O60232 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.53■□□□□ 0.08
SSSCA1O60232 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.53■□□□□ 0.08
SSSCA1O60232 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SSSCA1O60232 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.52■□□□□ 0.08
SSSCA1O60232 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.52■□□□□ 0.08
SSSCA1O60232 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SSSCA1O60232 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SSSCA1O60232 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.52■□□□□ 0.08
SSSCA1O60232 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SSSCA1O60232 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.52■□□□□ 0.08
SSSCA1O60232 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.52■□□□□ 0.08
SSSCA1O60232 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SSSCA1O60232 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms