Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.83■□□□□ 0.28
SGCEO43556 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.83■□□□□ 0.28
SGCEO43556 AL160286.2-201ENST00000567150 934 ntBASIC16.83■□□□□ 0.28
SGCEO43556 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SGCEO43556 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.83■□□□□ 0.28
SGCEO43556 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SGCEO43556 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.83■□□□□ 0.28
SGCEO43556 BX323043.1-201ENST00000641006 1765 ntBASIC16.83■□□□□ 0.28
SGCEO43556 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.83■□□□□ 0.28
SGCEO43556 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 AC005082.1-201ENST00000413042 2259 ntBASIC16.82■□□□□ 0.28
SGCEO43556 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SGCEO43556 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.82■□□□□ 0.28
SGCEO43556 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.82■□□□□ 0.28
SGCEO43556 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.82■□□□□ 0.28
SGCEO43556 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SGCEO43556 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.82■□□□□ 0.28
SGCEO43556 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SGCEO43556 FAM197Y4-202ENST00000622692 608 ntBASIC16.82■□□□□ 0.28
SGCEO43556 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SGCEO43556 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 AC106820.2-201ENST00000563775 3264 ntBASIC16.82■□□□□ 0.28
SGCEO43556 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.82■□□□□ 0.28
SGCEO43556 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.82■□□□□ 0.28
SGCEO43556 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SGCEO43556 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SGCEO43556 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SGCEO43556 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SGCEO43556 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.81■□□□□ 0.28
SGCEO43556 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.81■□□□□ 0.28
SGCEO43556 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SGCEO43556 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SGCEO43556 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SGCEO43556 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 AP000974.1-201ENST00000623909 2387 ntBASIC16.8■□□□□ 0.28
SGCEO43556 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.8■□□□□ 0.28
SGCEO43556 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SGCEO43556 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.8■□□□□ 0.28
SGCEO43556 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SGCEO43556 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.8■□□□□ 0.28
SGCEO43556 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.8■□□□□ 0.28
SGCEO43556 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.8■□□□□ 0.28
SGCEO43556 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.8■□□□□ 0.28
SGCEO43556 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.8■□□□□ 0.28
SGCEO43556 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.8■□□□□ 0.28
SGCEO43556 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SGCEO43556 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
SGCEO43556 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.8■□□□□ 0.28
SGCEO43556 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.8■□□□□ 0.28
SGCEO43556 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SGCEO43556 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SGCEO43556 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms