Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.56■□□□□ 0.24
XRCC2O43543 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.56■□□□□ 0.24
XRCC2O43543 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.56■□□□□ 0.24
XRCC2O43543 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC2O43543 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
XRCC2O43543 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC2O43543 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC2O43543 IRX1P1-201ENST00000438849 1838 ntBASIC16.56■□□□□ 0.24
XRCC2O43543 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.56■□□□□ 0.24
XRCC2O43543 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC2O43543 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
XRCC2O43543 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC2O43543 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XRCC2O43543 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
XRCC2O43543 FEM1AP3-201ENST00000403722 1741 ntBASIC16.56■□□□□ 0.24
XRCC2O43543 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
XRCC2O43543 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.56■□□□□ 0.24
XRCC2O43543 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.55■□□□□ 0.24
XRCC2O43543 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 AL353807.1-201ENST00000427475 662 ntBASIC16.55■□□□□ 0.24
XRCC2O43543 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.55■□□□□ 0.24
XRCC2O43543 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.55■□□□□ 0.24
XRCC2O43543 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.55■□□□□ 0.24
XRCC2O43543 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
XRCC2O43543 AL445675.2-201ENST00000620291 557 ntBASIC16.55■□□□□ 0.24
XRCC2O43543 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.55■□□□□ 0.24
XRCC2O43543 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
XRCC2O43543 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XRCC2O43543 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
XRCC2O43543 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.54■□□□□ 0.24
XRCC2O43543 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
XRCC2O43543 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
XRCC2O43543 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
XRCC2O43543 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 NIFKP9-201ENST00000419265 221 ntBASIC16.54■□□□□ 0.24
XRCC2O43543 AP002982.1-201ENST00000492365 877 ntBASIC16.54■□□□□ 0.24
XRCC2O43543 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.54■□□□□ 0.24
XRCC2O43543 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.54■□□□□ 0.24
XRCC2O43543 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.54■□□□□ 0.24
XRCC2O43543 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.54■□□□□ 0.24
XRCC2O43543 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.54■□□□□ 0.24
XRCC2O43543 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.54■□□□□ 0.24
XRCC2O43543 AL353708.3-201ENST00000610272 989 ntBASIC16.54■□□□□ 0.24
XRCC2O43543 AC131212.4-201ENST00000623606 975 ntBASIC16.54■□□□□ 0.24
XRCC2O43543 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.54■□□□□ 0.24
XRCC2O43543 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.54■□□□□ 0.24
XRCC2O43543 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
XRCC2O43543 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC2O43543 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC2O43543 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC2O43543 HTR7P1-201ENST00000538670 1336 ntBASIC16.53■□□□□ 0.24
XRCC2O43543 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.53■□□□□ 0.24
XRCC2O43543 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
XRCC2O43543 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
XRCC2O43543 RPPH1-201ENST00000516869 333 ntBASIC16.53■□□□□ 0.24
XRCC2O43543 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC2O43543 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.53■□□□□ 0.24
XRCC2O43543 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
XRCC2O43543 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms