Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.08■□□□□ 0.48
PROM1O43490 AC008550.1-201ENST00000511500 884 ntBASIC18.08■□□□□ 0.48
PROM1O43490 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.08■□□□□ 0.48
PROM1O43490 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.08■□□□□ 0.48
PROM1O43490 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.08■□□□□ 0.48
PROM1O43490 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.08■□□□□ 0.48
PROM1O43490 AC113410.3-201ENST00000623366 203 ntBASIC18.08■□□□□ 0.48
PROM1O43490 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 FEM1AP3-201ENST00000403722 1741 ntBASIC18.08■□□□□ 0.48
PROM1O43490 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.08■□□□□ 0.48
PROM1O43490 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PROM1O43490 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.08■□□□□ 0.48
PROM1O43490 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PROM1O43490 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM1O43490 FP475955.4-201ENST00000623131 1990 ntBASIC18.08■□□□□ 0.48
PROM1O43490 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PROM1O43490 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.07■□□□□ 0.48
PROM1O43490 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PROM1O43490 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PROM1O43490 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 AC004951.3-201ENST00000418645 1148 ntBASIC18.07■□□□□ 0.48
PROM1O43490 TSPY23P-201ENST00000440136 739 ntBASIC18.07■□□□□ 0.48
PROM1O43490 AC091390.4-202ENST00000476426 537 ntBASIC18.07■□□□□ 0.48
PROM1O43490 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.07■□□□□ 0.48
PROM1O43490 AC130371.2-201ENST00000619443 611 ntBASIC18.07■□□□□ 0.48
PROM1O43490 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
PROM1O43490 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.07■□□□□ 0.48
PROM1O43490 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PROM1O43490 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PROM1O43490 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PROM1O43490 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.06■□□□□ 0.48
PROM1O43490 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PROM1O43490 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.06■□□□□ 0.48
PROM1O43490 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.06■□□□□ 0.48
PROM1O43490 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.06■□□□□ 0.48
PROM1O43490 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PROM1O43490 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 AC011506.1-201ENST00000474329 610 ntBASIC18.06■□□□□ 0.48
PROM1O43490 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.06■□□□□ 0.48
PROM1O43490 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.06■□□□□ 0.48
PROM1O43490 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.06■□□□□ 0.48
PROM1O43490 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PROM1O43490 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PROM1O43490 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.06■□□□□ 0.48
PROM1O43490 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.06■□□□□ 0.48
PROM1O43490 MIR6786-201ENST00000616843 113 ntBASIC18.06■□□□□ 0.48
PROM1O43490 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.06■□□□□ 0.48
PROM1O43490 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.06■□□□□ 0.48
PROM1O43490 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.06■□□□□ 0.48
PROM1O43490 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.06■□□□□ 0.48
PROM1O43490 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.06■□□□□ 0.48
PROM1O43490 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PROM1O43490 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.05■□□□□ 0.48
PROM1O43490 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 AL049812.1-201ENST00000432563 2267 ntBASIC18.05■□□□□ 0.48
PROM1O43490 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.05■□□□□ 0.48
PROM1O43490 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PROM1O43490 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms