Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.77■□□□□ 0.92
TNRC18O15417 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 AC005829.1-201ENST00000570002 483 ntBASIC20.77■□□□□ 0.92
TNRC18O15417 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.77■□□□□ 0.92
TNRC18O15417 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.77■□□□□ 0.92
TNRC18O15417 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.77■□□□□ 0.92
TNRC18O15417 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.77■□□□□ 0.92
TNRC18O15417 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNRC18O15417 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 AC096582.2-201ENST00000510860 516 ntBASIC20.76■□□□□ 0.91
TNRC18O15417 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.76■□□□□ 0.91
TNRC18O15417 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.76■□□□□ 0.91
TNRC18O15417 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.76■□□□□ 0.91
TNRC18O15417 AL591684.3-201ENST00000605187 298 ntBASIC20.76■□□□□ 0.91
TNRC18O15417 AL008721.1-201ENST00000609964 604 ntBASIC20.76■□□□□ 0.91
TNRC18O15417 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TNRC18O15417 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TNRC18O15417 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TNRC18O15417 MIR5100-201ENST00000579544 119 ntBASIC20.76■□□□□ 0.91
TNRC18O15417 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.76■□□□□ 0.91
TNRC18O15417 AC093028.1-201ENST00000622998 982 ntBASIC20.76■□□□□ 0.91
TNRC18O15417 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TNRC18O15417 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.76■□□□□ 0.91
TNRC18O15417 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.76■□□□□ 0.91
TNRC18O15417 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.76■□□□□ 0.91
TNRC18O15417 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.76■□□□□ 0.91
TNRC18O15417 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.76■□□□□ 0.91
TNRC18O15417 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
TNRC18O15417 AC005336.2-201ENST00000593183 939 ntBASIC20.76■□□□□ 0.91
TNRC18O15417 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNRC18O15417 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNRC18O15417 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 AL139400.1-201ENST00000366220 510 ntBASIC20.75■□□□□ 0.91
TNRC18O15417 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.75■□□□□ 0.91
TNRC18O15417 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.75■□□□□ 0.91
TNRC18O15417 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.75■□□□□ 0.91
TNRC18O15417 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNRC18O15417 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNRC18O15417 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TNRC18O15417 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.74■□□□□ 0.91
TNRC18O15417 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.74■□□□□ 0.91
TNRC18O15417 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TNRC18O15417 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.74■□□□□ 0.91
TNRC18O15417 AC005498.2-205ENST00000593218 784 ntBASIC20.74■□□□□ 0.91
TNRC18O15417 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNRC18O15417 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.74■□□□□ 0.91
TNRC18O15417 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.74■□□□□ 0.91
TNRC18O15417 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.74■□□□□ 0.91
TNRC18O15417 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.74■□□□□ 0.91
TNRC18O15417 PHGDH-210ENST00000641115 1638 ntBASIC20.74■□□□□ 0.91
TNRC18O15417 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC20.74■□□□□ 0.91
TNRC18O15417 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNRC18O15417 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNRC18O15417 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNRC18O15417 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.73■□□□□ 0.91
TNRC18O15417 AC132008.2-207ENST00000454517 770 ntBASIC20.73■□□□□ 0.91
TNRC18O15417 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.73■□□□□ 0.91
TNRC18O15417 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
TNRC18O15417 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.73■□□□□ 0.91
TNRC18O15417 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNRC18O15417 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TNRC18O15417 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNRC18O15417 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms