Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.81■□□□□ 0.6
CACNB4O00305 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB4O00305 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CACNB4O00305 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
CACNB4O00305 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CACNB4O00305 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.81■□□□□ 0.6
CACNB4O00305 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CACNB4O00305 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CACNB4O00305 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CACNB4O00305 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNB4O00305 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.8■□□□□ 0.6
CACNB4O00305 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 DUX4L26-201ENST00000489078 1255 ntBASIC18.8■□□□□ 0.6
CACNB4O00305 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.8■□□□□ 0.6
CACNB4O00305 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CACNB4O00305 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CACNB4O00305 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
CACNB4O00305 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CACNB4O00305 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CACNB4O00305 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CACNB4O00305 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.79■□□□□ 0.6
CACNB4O00305 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNB4O00305 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNB4O00305 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CACNB4O00305 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CACNB4O00305 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CACNB4O00305 AC104076.2-201ENST00000448912 469 ntBASIC18.79■□□□□ 0.6
CACNB4O00305 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.79■□□□□ 0.6
CACNB4O00305 AL138966.2-201ENST00000621997 464 ntBASIC18.79■□□□□ 0.6
CACNB4O00305 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CACNB4O00305 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CACNB4O00305 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CACNB4O00305 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CACNB4O00305 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.79■□□□□ 0.6
CACNB4O00305 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
CACNB4O00305 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNB4O00305 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.78■□□□□ 0.6
CACNB4O00305 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 AC006011.2-201ENST00000621313 1158 ntBASIC18.78■□□□□ 0.6
CACNB4O00305 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CACNB4O00305 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
CACNB4O00305 AC141257.4-201ENST00000634557 245 ntBASIC18.78■□□□□ 0.6
CACNB4O00305 AC136944.6-201ENST00000634818 245 ntBASIC18.78■□□□□ 0.6
CACNB4O00305 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms